PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN13763.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 262aa    MW: 28466.4 Da    PI: 10.5429
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN13763.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1001.4e-31191248359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp ++++tYegeHnh+
  KHN13763.1 191 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPAMLVVTYEGEHNHT 248
                 99************************988****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105335.3E-17141187IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.805.7E-33177248IPR003657WRKY domain
PROSITE profilePS5081130.859184250IPR003657WRKY domain
SuperFamilySSF1182904.97E-27186249IPR003657WRKY domain
SMARTSM007744.2E-38189249IPR003657WRKY domain
PfamPF031064.0E-27191247IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MDCKVVADVA VSKFKKVISL LGRTRTGHAR FRRAPLPNQN QHTQPPSEPP VFHATPLHQI  60
PPPSLHQIPK TERNLNDSSS SKTIHFSYPS AATSFISSLT GDGAADNKHP AAGAPTPPFQ  120
ITSLSHVSSA GKPPLSTSSF KRKCSSENLG SGKCGSSSSR CHCSKKSRKM RLKRVVRVPA  180
ISLKMADIPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA LDDPAMLVVT  240
YEGEHNHTLS AADATNLILE SS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-221862511478Probable WRKY transcription factor 4
2lex_A7e-221862511478Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU3753560.0EU375356.1 Glycine max transcription factor (WRKY11) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001237671.11e-175transcription factor
SwissprotO221761e-83WRK15_ARATH; Probable WRKY transcription factor 15
TrEMBLA0A0B2Q1E40.0A0A0B2Q1E4_GLYSO; Putative WRKY transcription factor 15
STRINGGLYMA05G20710.11e-175(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21773486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.12e-71WRKY DNA-binding protein 15
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]